Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | AMETH_RS06355 | Not Available | Negative | 1302412 - 1303338 | 34854.1 |
| hypothetical protein | AMETH_RS06360 | Not Available | Negative | 1303335 - 1303532 | 6311.66 |
| hypothetical protein | AMETH_RS37750 | Not Available | Positive | 1303604 - 1303750 | 4630.45 |
| hypothetical protein | AMETH_RS06365 | Not Available | Positive | 1303753 - 1304070 | 11094.2 |
| type iia dna topoisomerase subunit b | AMETH_RS06370 | Not Available | Positive | 1304169 - 1306226 | 74715.4 |
| dna topoisomerase (atp-hydrolyzing) subunit a | AMETH_RS06375 | Not Available | Positive | 1306249 - 1308738 | 89933.2 |
| alpha/beta hydrolase | AMETH_RS06380 | Not Available | Positive | 1309000 - 1309749 | 26071.1 |
| spoiie family protein phosphatase | AMETH_RS06385 | Not Available | Positive | 1309807 - 1311411 | 57284.3 |
| stas domain-containing protein | AMETH_RS06390 | Not Available | Positive | 1311408 - 1311728 | 11397.7 |
| tigr03557 family f420-dependent llm class oxidoreductase | AMETH_RS06395 | Not Available | Positive | 1311751 - 1312704 | 34557.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
