Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | AMETH_RS05725 | Not Available | Positive | 1170888 - 1171364 | 17847.6 |
| amidohydrolase family protein | AMETH_RS05730 | Not Available | Positive | 1171365 - 1172255 | 32911.4 |
| acyltransferase | AMETH_RS05735 | Not Available | Negative | 1172245 - 1173528 | 44543.5 |
| hypothetical protein | AMETH_RS05740 | Not Available | Negative | 1173626 - 1173844 | 8091.46 |
| marr family winged helix-turn-helix transcriptional regulator | AMETH_RS05745 | Not Available | Negative | 1173939 - 1174394 | 17067.5 |
| cupin domain-containing protein | AMETH_RS05750 | Not Available | Positive | 1174474 - 1174845 | 12982.7 |
| response regulator transcription factor | AMETH_RS05755 | Not Available | Negative | 1174842 - 1175486 | 22611.3 |
| sensor domain-containing protein | AMETH_RS05760 | Not Available | Negative | 1175541 - 1176680 | 40826.8 |
| sensor domain-containing protein | AMETH_RS05765 | Not Available | Negative | 1176680 - 1177387 | 25389.6 |
| Tmrna,resume consensus sequence (at 89): aataagcgccaagactaa | Not Available | Not Available | Positive | 1177519 - 1177889 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
