Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | AMETH_RS00040 | Not Available | Positive | 8094 - 10061 | 72589.8 |
| dna gyrase subunit a | AMETH_RS00045 | Not Available | Positive | 10104 - 12623 | 93236.4 |
| duf3566 domain-containing protein | AMETH_RS00050 | Not Available | Positive | 12624 - 13340 | 24718.2 |
| Trna-ile | Not Available | Not Available | Positive | 13371 - 13447 | Not Available |
| site-specific integrase | AMETH_RS00060 | Not Available | Negative | 13570 - 14940 | 51137.1 |
| helix-turn-helix domain-containing protein | AMETH_RS00065 | Not Available | Negative | 14940 - 15179 | 8239.92 |
| duf3631 domain-containing protein | AMETH_RS00070 | Not Available | Negative | 15235 - 16485 | 45321.7 |
| hypothetical protein | AMETH_RS00075 | Not Available | Negative | 16485 - 16997 | 18374.0 |
| hypothetical protein | AMETH_RS38485 | Not Available | Negative | 17084 - 17254 | 6178.48 |
| ftsk/spoiiie domain-containing protein | AMETH_RS00080 | Not Available | Negative | 17617 - 19830 | 81146.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
