Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AMETH_RS04785 | Not Available | Negative | 965027 - 965398 | 13357.0 |
| helix-turn-helix transcriptional regulator | AMETH_RS04790 | Not Available | Negative | 965423 - 966196 | 27071.6 |
| o-methyltransferase | AMETH_RS04795 | Not Available | Negative | 966318 - 966956 | 22241.8 |
| rna polymerase sigma factor sige | AMETH_RS04800 | Not Available | Positive | 967168 - 967764 | 22449.2 |
| anti-sigma factor | AMETH_RS04805 | Not Available | Positive | 967761 - 968414 | 21828.8 |
| s1c family serine protease | AMETH_RS04810 | Not Available | Positive | 968496 - 970019 | 51431.5 |
| sec-independent protein translocase protein tatb | AMETH_RS04815 | Not Available | Positive | 970122 - 970535 | 14933.7 |
| mrp/nbp35 family atp-binding protein | AMETH_RS04820 | Not Available | Negative | 970871 - 972016 | 40306.1 |
| duf1003 domain-containing protein | AMETH_RS04825 | Not Available | Negative | 972026 - 972547 | 19586.5 |
| magnesium transporter mgte n-terminal domain-containing protein | AMETH_RS04830 | Not Available | Negative | 972540 - 973832 | 46964.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
