Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis methanolica |
| Strain | 239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1028183 bp
Thymine Count
1032505 bp
Guanine Count
2597107 bp
Cytosine Count
2579596 bp
Genome Length
7237391 bp
Protein-coding Genes
7360 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | AMETH_RS04685 | Not Available | Positive | 948441 - 948761 | 11701.5 |
| succinyldiaminopimelate transaminase | AMETH_RS04690 | Not Available | Positive | 948758 - 949852 | 38739.1 |
| tetr/acrr family transcriptional regulator | AMETH_RS04695 | Not Available | Negative | 949846 - 950442 | 22065.7 |
| short-chain dehydrogenase | AMETH_RS04700 | Not Available | Positive | 950480 - 951890 | 49725.4 |
| chad domain-containing protein | AMETH_RS04705 | Not Available | Negative | 951933 - 952844 | 32952.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AMETH_RS04710 | Not Available | Negative | 952911 - 953891 | 33660.1 |
| hypothetical protein | AMETH_RS04715 | Not Available | Negative | 953907 - 954341 | 14581.4 |
| succinyl-diaminopimelate desuccinylase | AMETH_RS04720 | Not Available | Positive | 954376 - 955452 | 38125.3 |
| tigr00730 family rossman fold protein | AMETH_RS04725 | Not Available | Positive | 955478 - 956248 | 28459.8 |
| tigr00730 family rossman fold protein | AMETH_RS04730 | Not Available | Positive | 956249 - 956815 | 20097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
