Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium marinum |
| Strain | AK15 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1479072 bp
Thymine Count
1497800 bp
Guanine Count
1296943 bp
Cytosine Count
1263147 bp
Genome Length
5536962 bp
Protein-coding Genes
4853 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase metallocenter (nife) assembly protein hypf | C942_03206 | Not Available | Negative | 4589222 - 4591618 | 88544.7 |
| hupe-urej family metal transporter | C942_03207 | Not Available | Negative | 4591635 - 4592213 | 19947.5 |
| formate dehydrogenase chain d | C942_03208 | Not Available | Negative | 4592248 - 4593084 | 30728.3 |
| formate hydrogenlyase transcriptional activator | C942_03209 | Not Available | Negative | 4593161 - 4595218 | 77482.6 |
| electron transport protein hydn | C942_03211 | Not Available | Negative | 4597608 - 4598090 | 17218.0 |
| hypothetical protein | C942_03212 | Not Available | Positive | 4598079 - 4598270 | 7027.43 |
| coenzyme hydrogenase maturation protease | C942_03213 | Not Available | Negative | 4598382 - 4598840 | 16498.0 |
| formate hydrogenlyase maturation protein hych | C942_03214 | Not Available | Negative | 4598837 - 4599376 | 19985.6 |
| formate hydrogenlyase subunit 7 | C942_03215 | Not Available | Negative | 4599366 - 4600175 | 29173.2 |
| formate hydrogenlyase complex 3 iron-sulfur protein | C942_03216 | Not Available | Negative | 4600172 - 4600720 | 20568.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


