Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium marinum |
| Strain | AK15 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1479072 bp
Thymine Count
1497800 bp
Guanine Count
1296943 bp
Cytosine Count
1263147 bp
Genome Length
5536962 bp
Protein-coding Genes
4853 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein sypl involved in exopolysaccharide production | C942_02939 | Not Available | Positive | 4333654 - 4334985 | 49175.6 |
| acetyltransferase sypm | C942_02940 | Not Available | Positive | 4334969 - 4335664 | 25207.2 |
| glycosyltransferase sypn | C942_02941 | Not Available | Positive | 4335666 - 4336817 | 43439.5 |
| hypothetical protein | C942_02942 | Not Available | Positive | 4336887 - 4337222 | 12449.2 |
| polysaccharide biosynthesis chain length regulator sypo | C942_02943 | Not Available | Positive | 4337314 - 4338669 | 50973.9 |
| glycosyltransferase sypp | C942_02944 | Not Available | Positive | 4338666 - 4339736 | 39944.9 |
| sugar transferase sypr involved in lipopolysaccharide synthesis | C942_02945 | Not Available | Positive | 4339754 - 4341571 | 67849.9 |
| anti anti-sigma regulatory factor sypa | C942_02946 | Not Available | Positive | 4341657 - 4341971 | 11895.7 |
| outer membrane protein sypb | C942_02947 | Not Available | Positive | 4341973 - 4342767 | 30784.5 |
| periplasmic protein sypc involved in polysaccharide export | C942_02948 | Not Available | Positive | 4342764 - 4344851 | 76072.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


