Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium marinum |
| Strain | AK15 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1479072 bp
Thymine Count
1497800 bp
Guanine Count
1296943 bp
Cytosine Count
1263147 bp
Genome Length
5536962 bp
Protein-coding Genes
4853 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase a | C942_02238 | Not Available | Negative | 3706352 - 3707071 | 27317.4 |
| rna polymerase associated protein rapa | C942_02239 | Not Available | Negative | 3707216 - 3710134 | 109845.0 |
| putative atpase | C942_02240 | Not Available | Positive | 3710443 - 3711819 | 51464.5 |
| thiamin abc transporter, atpase component | C942_02241 | Not Available | Negative | 3711876 - 3712601 | 26589.3 |
| thiamin abc transporter, transmembrane component | C942_02242 | Not Available | Negative | 3712601 - 3714190 | 58007.9 |
| thiamin abc transporter, substrate-binding component | C942_02243 | Not Available | Negative | 3714204 - 3715187 | 36320.1 |
| hypothetical protein | C942_02244 | Not Available | Negative | 3715544 - 3716332 | 30492.2 |
| 3-isopropylmalate dehydratase small subunit | C942_02245 | Not Available | Negative | 3716571 - 3717173 | 22567.6 |
| 3-isopropylmalate dehydratase large subunit | C942_02246 | Not Available | Negative | 3717186 - 3718625 | 51527.7 |
| 3-isopropylmalate dehydrogenase | C942_02247 | Not Available | Negative | 3718649 - 3719737 | 39351.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


