Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium marinum |
| Strain | AK15 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1479072 bp
Thymine Count
1497800 bp
Guanine Count
1296943 bp
Cytosine Count
1263147 bp
Genome Length
5536962 bp
Protein-coding Genes
4853 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c heme lyase subunit ccmh | C942_01648 | Not Available | Negative | 3055907 - 3057118 | 44611.6 |
| cytochrome c heme lyase subunit ccml | C942_01649 | Not Available | Negative | 3057118 - 3057621 | 18674.7 |
| cytochrome c-type biogenesis protein ccmg/dsbe, thiol:disulfide oxidoreductase | C942_01650 | Not Available | Negative | 3057618 - 3058172 | 20698.3 |
| cytochrome c heme lyase subunit ccmf | C942_01651 | Not Available | Negative | 3058172 - 3060151 | 72725.0 |
| cytochrome c-type biogenesis protein ccme, heme chaperone | C942_01652 | Not Available | Negative | 3060148 - 3060633 | 17606.4 |
| cytochrome c-type biogenesis protein ccmd, interacts with ccmce | C942_01653 | Not Available | Negative | 3060630 - 3060836 | 7835.58 |
| cytochrome c-type biogenesis protein ccmc, putative heme lyase for ccme | C942_01654 | Not Available | Negative | 3060844 - 3061575 | 27250.9 |
| abc transporter involved in cytochrome c biogenesis, ccmb subunit | C942_01655 | Not Available | Negative | 3061618 - 3062286 | 23821.5 |
| abc transporter involved in cytochrome c biogenesis, atpase component ccma | C942_01656 | Not Available | Negative | 3062293 - 3062943 | 24055.8 |
| hypothetical protein | C942_01657 | Not Available | Positive | 3063334 - 3063912 | 21414.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


