Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium marinum |
| Strain | AK15 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1479072 bp
Thymine Count
1497800 bp
Guanine Count
1296943 bp
Cytosine Count
1263147 bp
Genome Length
5536962 bp
Protein-coding Genes
4853 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| folate-dependent protein for fe/s cluster synthesis/repair in oxidative stress | C942_01140 | Not Available | Negative | 2952587 - 2953567 | 35623.1 |
| ygfy protein | C942_01141 | Not Available | Positive | 2953850 - 2954110 | 9934.93 |
| putative cell shape-determining protein | C942_01142 | Not Available | Positive | 2954082 - 2954516 | 16596.6 |
| methyl-accepting chemotaxis protein i | C942_01143 | Not Available | Positive | 2954735 - 2956564 | 66303.4 |
| l-aspartate oxidase | C942_01144 | Not Available | Negative | 2956721 - 2958346 | 60619.6 |
| rna polymerase sigma factor rpoe | C942_01145 | Not Available | Positive | 2958732 - 2959310 | 21855.1 |
| sigma factor rpoe negative regulatory protein rsea | C942_01146 | Not Available | Positive | 2959336 - 2959989 | 23671.7 |
| sigma factor rpoe negative regulatory protein rseb precursor | C942_01147 | Not Available | Positive | 2960002 - 2960991 | 36645.2 |
| sigma factor rpoe regulatory protein rsec | C942_01148 | Not Available | Positive | 2960988 - 2961485 | 17405.5 |
| translation elongation factor lepa | C942_01149 | Not Available | Positive | 2961564 - 2963360 | 66319.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


