Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium marinum |
| Strain | AK15 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1479072 bp
Thymine Count
1497800 bp
Guanine Count
1296943 bp
Cytosine Count
1263147 bp
Genome Length
5536962 bp
Protein-coding Genes
4853 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii/iv secretion system atp hydrolase tada/virb11/cpaf, tada subfamily | C942_00979 | Not Available | Positive | 2775593 - 2776954 | 50266.5 |
| flp pilus assembly protein tadb | C942_00980 | Not Available | Positive | 2776954 - 2777925 | 36411.5 |
| type ii/iv secretion system protein tadc, associated with flp pilus assembly | C942_00981 | Not Available | Positive | 2777927 - 2778886 | 35442.5 |
| flp pilus assembly protein tadd | C942_00982 | Not Available | Positive | 2778911 - 2780008 | 40978.1 |
| ggdef domain protein | C942_00983 | Not Available | Positive | 2780248 - 2781516 | 47981.8 |
| mobile element protein | C942_00984 | Not Available | Negative | 2781525 - 2781902 | 14231.0 |
| aspartate aminotransferase | C942_00985 | Not Available | Positive | 2782143 - 2783261 | 41830.4 |
| hypothetical protein | C942_00986 | Not Available | Positive | 2783689 - 2784771 | 40068.7 |
| extracellular deoxyribonuclease xds | C942_00987 | Not Available | Positive | 2784831 - 2788037 | 117728.0 |
| deoxyribose operon repressor, deor family | C942_00988 | Not Available | Negative | 2788167 - 2788907 | 27504.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


