Escherichia coli O145 str. RM9872

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O145 str. RM9872 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or singles. This strain is characterized as a facultative anaerobe, indicating it can grow in both the presence and absence of oxygen. E. coli O145 str. RM9872 is motile, possessing flagella that facilitate its movement. The optimal growth temperature for this strain is 37°C, and it falls within the mesophilic temperature range. This bacterium has a unique genomic structure, comprising two replicons and two membranes, which is typical for members of the Enterobacteriaceae family. E. coli O145 str. RM9872 is associated with host organisms yet is also classified as free-living, indicating its ability to survive independently in various environments. The two accession numbers, NZ_CP028380.1 and NZ_CP028379.1, provide references to its genomic data, which could be valuable for further studies on its genetic characteristics and potential applications in microbiology. In ecological terms, the ability of E. coli O145 str. RM9872 to thrive as a free-living organism while also being host-associated suggests its versatility in adapting to different environments. This adaptability may play a significant role in its ecological interactions, including its potential impact on gut microbiota and its involvement in nutrient cycling within host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO145 RM9872

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O145 str. RM9872
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O145 str. RM9872 chromosome, complete genome.

Gene Summary

Adenine Count

1326319 bp

Thymine Count

1326450 bp

Guanine Count

1364669 bp

Cytosine Count

1368486 bp

Genome Length

5385924 bp

Protein-coding Genes

4514 genes

Non-Coding Genes

845 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murein dd-endopeptidase mepmI3Y_RS12290Not AvailableNegative2351161 - 235248349060.6
zinc abc transporter substrate-binding protein znuaI3Y_RS12295Not AvailableNegative2352499 - 235343133851.3
zinc abc transporter atp-binding protein znucI3Y_RS12300Not AvailablePositive2353510 - 235426527869.3
zinc abc transporter permease subunit znubI3Y_RS12305Not AvailablePositive2354262 - 235504727778.5
holliday junction branch migration dna helicase ruvbI3Y_RS12310Not AvailableNegative2355293 - 235630337176.0
holliday junction branch migration protein ruvaI3Y_RS12315Not AvailableNegative2356312 - 235692322087.0
stress response small protein yobiI3Y_RS12320Not AvailableNegative2357062 - 23571272631.41
yebb family permuted papain-like enzymeI3Y_RS12325Not AvailablePositive2357198 - 235780022677.2
crossover junction endodeoxyribonuclease ruvcI3Y_RS12330Not AvailableNegative2357802 - 235832318747.9
yebc/pmpr family dna-binding transcriptional regulatorI3Y_RS12335Not AvailableNegative2358358 - 235909826424.0

Displaying genes 2731 – 2740 of 5448 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.