Helicobacter pylori Aklavik86

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori Aklavik86 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. Its habitat is host-associated, indicating a close relationship with its hosts, likely contributing to its ecological niche within the gastrointestinal tract. This organism exhibits a cell arrangement of singles and is non-motile, which suggests a specific adaptation to its environment despite its flagella presence. H. pylori Aklavik86 thrives optimally at 37°C, placing it within the mesophilic temperature range, which is typical for many human-associated pathogens. The bacterium possesses three replicons and two membranes, a trait common among Gram-negative bacteria, which may affect its genetic stability and adaptability. Interestingly, H. pylori Aklavik86 is classified as free-living, which may indicate that it can survive outside of a host under certain conditions, although it is primarily associated with host environments. This duality suggests potential implications for its transmission and survival strategies. The genomic accessions for H. pylori Aklavik86 are NC_019564.1, NC_019563.1, and NC_019565.1, which provide a basis for further genetic and functional studies. Understanding the traits of H. pylori Aklavik86 not only highlights its unique biological characteristics but also emphasizes its role in the human microbiome and potential impacts on human health, particularly in relation to gastric diseases.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainAklavik86

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Aklavik86
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Aklavik86 plasmid p1HPAKL86, complete

Gene Summary

Adenine Count

4057 bp

Thymine Count

3963 bp

Guanine Count

2170 bp

Cytosine Count

1923 bp

Genome Length

12113 bp

Protein-coding Genes

12 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatidylserine decarboxylaseHPAKL86_RS06920Not AvailableNegative1429432 - 143023530027.2
duf6115 domain-containing proteinHPAKL86_RS06925Not AvailableNegative1430232 - 143073519586.7
hypothetical proteinHPAKL86_RS06930Not AvailableNegative1430748 - 143124218994.2
menaquinone biosynthesis prenyltransferase mqnpHPAKL86_RS06935Not AvailableNegative1431235 - 143207731247.1
comec/rec2 family competence proteinHPAKL86_RS06940Not AvailableNegative1432148 - 143346150215.1
replicative dna helicaseHPAKL86_RS06945Not AvailableNegative1433458 - 143491855720.9
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseHPAKL86_RS06950Not AvailableNegative1434929 - 143631750458.8
copper-sensing histidine kinase crdsHPAKL86_RS06955Not AvailableNegative1436320 - 143752246258.8
copper response regulator transcription factor crdrHPAKL86_RS06960Not AvailableNegative1437488 - 143812924800.0
sprt family zinc-dependent metalloproteaseHPAKL86_RS07630Not AvailablePositive1438304 - 14384645947.5

Displaying genes 1391 – 1400 of 1453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.