Helicobacter pylori Aklavik86

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori Aklavik86 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. Its habitat is host-associated, indicating a close relationship with its hosts, likely contributing to its ecological niche within the gastrointestinal tract. This organism exhibits a cell arrangement of singles and is non-motile, which suggests a specific adaptation to its environment despite its flagella presence. H. pylori Aklavik86 thrives optimally at 37°C, placing it within the mesophilic temperature range, which is typical for many human-associated pathogens. The bacterium possesses three replicons and two membranes, a trait common among Gram-negative bacteria, which may affect its genetic stability and adaptability. Interestingly, H. pylori Aklavik86 is classified as free-living, which may indicate that it can survive outside of a host under certain conditions, although it is primarily associated with host environments. This duality suggests potential implications for its transmission and survival strategies. The genomic accessions for H. pylori Aklavik86 are NC_019564.1, NC_019563.1, and NC_019565.1, which provide a basis for further genetic and functional studies. Understanding the traits of H. pylori Aklavik86 not only highlights its unique biological characteristics but also emphasizes its role in the human microbiome and potential impacts on human health, particularly in relation to gastric diseases.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainAklavik86

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Aklavik86
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Aklavik86 plasmid p1HPAKL86, complete

Gene Summary

Adenine Count

4057 bp

Thymine Count

3963 bp

Guanine Count

2170 bp

Cytosine Count

1923 bp

Genome Length

12113 bp

Protein-coding Genes

12 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crossover junction endodeoxyribonuclease ruvcHPAKL86_RS05515Not AvailableNegative1140342 - 114081517413.4
nyn domain-containing proteinHPAKL86_RS05520Not AvailablePositive1140947 - 114167228138.7
duf3519 domain-containing proteinHPAKL86_RS07820Not AvailableNegative1141835 - 11419725293.29
sprt family zinc-dependent metalloproteaseHPAKL86_RS05525Not AvailableNegative1141984 - 114283532274.1
holliday junction branch migration protein ruvaHPAKL86_RS05530Not AvailableNegative1143066 - 114361720290.2
fapa family proteinHPAKL86_RS05535Not AvailableNegative1143642 - 114547470281.4
murein biosynthesis integral membrane protein murjHPAKL86_RS05540Not AvailablePositive1145567 - 114702754382.8
cysteine--trna ligaseHPAKL86_RS05545Not AvailablePositive1147028 - 114842553194.9
vacuolating cyotoxin family proteinHPAKL86_RS05550Not AvailablePositive1148650 - 1152606142263.0
fkbm family methyltransferaseHPAKL86_RS05555Not AvailableNegative1152922 - 115345520371.4

Displaying genes 1111 – 1120 of 1453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.