Candidatus Paraburkholderia kirkii UZHbot1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Candidatus Paraburkholderia kirkii UZHbot1 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This organism has a single replicon, suggesting a streamlined genetic structure. The genomic sequence of Candidatus Paraburkholderia kirkii UZHbot1 is cataloged under the accession number CAFE00000000.1, which provides a reference for further investigation into its genetic makeup. The presence of flagella in Candidatus Paraburkholderia kirkii UZHbot1 likely contributes to its adaptability in diverse environments, allowing it to navigate through its surroundings effectively. This motility can be crucial for accessing nutrients and avoiding unfavorable conditions, which is a common trait among many bacteria that thrive in complex ecosystems. Understanding the characteristics of Candidatus Paraburkholderia kirkii UZHbot1 may provide insights into its ecological role and interactions within its habitat. As a member of the Burkholderia genus, it may play a significant role in nutrient cycling or plant-microbe interactions, although specific ecological functions are not detailed in the available data. The streamlined genetic structure, coupled with its motility, suggests that this bacterium could be well-adapted to its niche, potentially influencing the microbial community dynamics in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesCandidatus Paraburkholderia kirkii
StrainUZHbot1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Paraburkholderia kirkii UZHbot1


Gene Summary

Adenine Count

742023 bp

Thymine Count

738022 bp

Guanine Count

1255856 bp

Cytosine Count

1254837 bp

Genome Length

3990738 bp

Protein-coding Genes

2073 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rod shape-determining protein rodaBKIR_c17_4542Not AvailableNegative1204395 - 120554341951.0
penicillin-binding protein 2 (pbp-2)BKIR_c17_4543Not AvailableNegative1205567 - 120781981468.6
rod shape-determining protein mredBKIR_c17_4544Not AvailableNegative1207912 - 120842419110.1
rod shape-determining protein mrecBKIR_c17_4545Not AvailableNegative1208421 - 120955139002.1
rod shape-determining protein mrebBKIR_c17_4547Not AvailableNegative1209748 - 121079136898.8
aspartyl-trna(asn) amidotransferase subunit c and glutamyl-trna(gln) amidotransferasesubunit cBKIR_c17_4548Not AvailablePositive1211150 - 121147612227.6
aspartyl-trna(asn) amidotransferase subunit a,glutamyl-trna(gln) amidotransferasesubunit aBKIR_c17_4549Not AvailablePositive1211555 - 121304852925.8
aspartyl-trna(asn) amidotransferase subunit b @ glutamyl-trna(gln) amidotransferasesubunit bBKIR_c17_4550Not AvailablePositive1213045 - 121452053897.3
exodeoxyribonuclease iiiBKIR_c17_4552Not AvailablePositive1215495 - 121628030154.3
noneBKIR_c170_1729Not AvailablePositive1218311 - 121876917096.7

Displaying genes 631 – 640 of 2140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.