Candidatus Paraburkholderia kirkii UZHbot1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Candidatus Paraburkholderia kirkii UZHbot1 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This organism has a single replicon, suggesting a streamlined genetic structure. The genomic sequence of Candidatus Paraburkholderia kirkii UZHbot1 is cataloged under the accession number CAFE00000000.1, which provides a reference for further investigation into its genetic makeup. The presence of flagella in Candidatus Paraburkholderia kirkii UZHbot1 likely contributes to its adaptability in diverse environments, allowing it to navigate through its surroundings effectively. This motility can be crucial for accessing nutrients and avoiding unfavorable conditions, which is a common trait among many bacteria that thrive in complex ecosystems. Understanding the characteristics of Candidatus Paraburkholderia kirkii UZHbot1 may provide insights into its ecological role and interactions within its habitat. As a member of the Burkholderia genus, it may play a significant role in nutrient cycling or plant-microbe interactions, although specific ecological functions are not detailed in the available data. The streamlined genetic structure, coupled with its motility, suggests that this bacterium could be well-adapted to its niche, potentially influencing the microbial community dynamics in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesCandidatus Paraburkholderia kirkii
StrainUZHbot1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Paraburkholderia kirkii UZHbot1


Gene Summary

Adenine Count

742023 bp

Thymine Count

738022 bp

Guanine Count

1255856 bp

Cytosine Count

1254837 bp

Genome Length

3990738 bp

Protein-coding Genes

2073 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2,3,4,5-tetrahydropyridine-2,6-dicarboxylaten- su c cinyltransferaseBKIR_c11_4421Not AvailableNegative255671 - 25662733897.2
probable transmembrane proteinBKIR_c11_4425Not AvailablePositive258073 - 25900832890.2
chromosome partition protein smcBKIR_c11_4427Not AvailablePositive259139 - 262654129831.0
cell division proteinBKIR_c11_4428Not AvailablePositive262834 - 26408445054.4
dna ligaseBKIR_c11_4429Not AvailablePositive264279 - 26635775314.7
peptide deformylaseBKIR_c11_4430Not AvailablePositive266354 - 26688719937.0
transcription accessory protein (s1 rna-binding domain)BKIR_c11_4431Not AvailableNegative266987 - 26929984187.6
membrane protein involved in colicin uptakeBKIR_c11_4433Not AvailablePositive269604 - 27044331824.6
ding family atp-dependent helicase yoaaBKIR_c11_4435Not AvailablePositive270793 - 27302481596.4
probable component of the lipoprotein assembly complex (forms a complex with yaet, yfgl, and nlpb)BKIR_c11_4436Not AvailableNegative273100 - 27393331483.9

Displaying genes 141 – 150 of 2140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.