Candidatus Paraburkholderia kirkii UZHbot1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Candidatus Paraburkholderia kirkii UZHbot1 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This organism has a single replicon, suggesting a streamlined genetic structure. The genomic sequence of Candidatus Paraburkholderia kirkii UZHbot1 is cataloged under the accession number CAFE00000000.1, which provides a reference for further investigation into its genetic makeup. The presence of flagella in Candidatus Paraburkholderia kirkii UZHbot1 likely contributes to its adaptability in diverse environments, allowing it to navigate through its surroundings effectively. This motility can be crucial for accessing nutrients and avoiding unfavorable conditions, which is a common trait among many bacteria that thrive in complex ecosystems. Understanding the characteristics of Candidatus Paraburkholderia kirkii UZHbot1 may provide insights into its ecological role and interactions within its habitat. As a member of the Burkholderia genus, it may play a significant role in nutrient cycling or plant-microbe interactions, although specific ecological functions are not detailed in the available data. The streamlined genetic structure, coupled with its motility, suggests that this bacterium could be well-adapted to its niche, potentially influencing the microbial community dynamics in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesCandidatus Paraburkholderia kirkii
StrainUZHbot1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Paraburkholderia kirkii UZHbot1


Gene Summary

Adenine Count

742023 bp

Thymine Count

738022 bp

Guanine Count

1255856 bp

Cytosine Count

1254837 bp

Genome Length

3990738 bp

Protein-coding Genes

2073 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide abc transporter, atp-binding protein lptbBKIR_c79_3388Not AvailableNegative3504153 - 350492028000.0
lpta, protein essential for lps transport across the periplasmBKIR_c79_3389Not AvailableNegative3504932 - 350563024990.3
probable transmembrane proteinBKIR_c79_3390Not AvailableNegative3505661 - 350626321887.0
3-deoxy-d-manno-octulosonate 8-phosphatephosphataseBKIR_c79_3391Not AvailableNegative3506268 - 350681319131.0
arabinose 5-phosphate isomeraseBKIR_c79_3392Not AvailableNegative3506840 - 350782334881.3
glutathione-regulated potassium-efflux system protein kefbBKIR_c79_3394Not AvailablePositive3508168 - 350925639849.3
adenine phosphoribosyltransferaseBKIR_c79_3397Not AvailablePositive3509991 - 351055720769.4
formyltetrahydrofolate deformylaseBKIR_c79_3402Not AvailablePositive3512050 - 351291932580.2
noneBKIR_c8_3427Not AvailablePositive3513399 - 351371310810.0
noneBKIR_c8_3428Not AvailableNegative3513797 - 351451624974.0

Displaying genes 1881 – 1890 of 2140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.