Candidatus Paraburkholderia kirkii UZHbot1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Candidatus Paraburkholderia kirkii UZHbot1 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This organism has a single replicon, suggesting a streamlined genetic structure. The genomic sequence of Candidatus Paraburkholderia kirkii UZHbot1 is cataloged under the accession number CAFE00000000.1, which provides a reference for further investigation into its genetic makeup. The presence of flagella in Candidatus Paraburkholderia kirkii UZHbot1 likely contributes to its adaptability in diverse environments, allowing it to navigate through its surroundings effectively. This motility can be crucial for accessing nutrients and avoiding unfavorable conditions, which is a common trait among many bacteria that thrive in complex ecosystems. Understanding the characteristics of Candidatus Paraburkholderia kirkii UZHbot1 may provide insights into its ecological role and interactions within its habitat. As a member of the Burkholderia genus, it may play a significant role in nutrient cycling or plant-microbe interactions, although specific ecological functions are not detailed in the available data. The streamlined genetic structure, coupled with its motility, suggests that this bacterium could be well-adapted to its niche, potentially influencing the microbial community dynamics in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesCandidatus Paraburkholderia kirkii
StrainUZHbot1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Paraburkholderia kirkii UZHbot1


Gene Summary

Adenine Count

742023 bp

Thymine Count

738022 bp

Guanine Count

1255856 bp

Cytosine Count

1254837 bp

Genome Length

3990738 bp

Protein-coding Genes

2073 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylglucosamine1-carboxyvinyl transferaseBKIR_c36_3526Not AvailableNegative2218735 - 222008147591.9
yrba proteinBKIR_c36_3527Not AvailableNegative2220162 - 22204018823.69
abc-type multidrug transport system, permease componentBKIR_c36_3528Not AvailableNegative2220417 - 222117227682.6
abc-type multidrug transport system, atpase componentBKIR_c36_3529Not AvailableNegative2221169 - 222209834385.6
anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)BKIR_c36_3530Not AvailableNegative2222297 - 222259310020.9
uncharacterized abc transporter, auxiliary component yrbcBKIR_c36_3531Not AvailableNegative2222590 - 222321923913.8
trna dihydrouridine synthase bBKIR_c37_3336Not AvailablePositive2226517 - 222761139576.4
dna-binding protein fisBKIR_c37_3337Not AvailablePositive2227608 - 22278418805.53
imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferaseBKIR_c37_3338Not AvailablePositive2227897 - 222947156435.4
crossover junction endodeoxyribonuclease ruvcBKIR_c37_3339Not AvailablePositive2229573 - 223011518615.8

Displaying genes 1201 – 1210 of 2140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.