Candidatus Paraburkholderia kirkii UZHbot1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Candidatus Paraburkholderia kirkii UZHbot1 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This organism has a single replicon, suggesting a streamlined genetic structure. The genomic sequence of Candidatus Paraburkholderia kirkii UZHbot1 is cataloged under the accession number CAFE00000000.1, which provides a reference for further investigation into its genetic makeup. The presence of flagella in Candidatus Paraburkholderia kirkii UZHbot1 likely contributes to its adaptability in diverse environments, allowing it to navigate through its surroundings effectively. This motility can be crucial for accessing nutrients and avoiding unfavorable conditions, which is a common trait among many bacteria that thrive in complex ecosystems. Understanding the characteristics of Candidatus Paraburkholderia kirkii UZHbot1 may provide insights into its ecological role and interactions within its habitat. As a member of the Burkholderia genus, it may play a significant role in nutrient cycling or plant-microbe interactions, although specific ecological functions are not detailed in the available data. The streamlined genetic structure, coupled with its motility, suggests that this bacterium could be well-adapted to its niche, potentially influencing the microbial community dynamics in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesCandidatus Paraburkholderia kirkii
StrainUZHbot1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Paraburkholderia kirkii UZHbot1


Gene Summary

Adenine Count

742023 bp

Thymine Count

738022 bp

Guanine Count

1255856 bp

Cytosine Count

1254837 bp

Genome Length

3990738 bp

Protein-coding Genes

2073 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent epimerase/dehydrataseBKIR_c33_3866Not AvailablePositive2116636 - 211759234306.6
trna nucleotidyltransferaseBKIR_c33_3869Not AvailablePositive2118220 - 211945545529.8
flagellar motor switch protein flinBKIR_c33_3873Not AvailablePositive2120883 - 212181832793.3
noneBKIR_c33_3875Not AvailableNegative2122119 - 212279324921.9
high-affinity branched-chain amino acid transport system permease protein livh (tc 3.a.1.4.1)BKIR_c33_3880Not AvailablePositive2124814 - 212568330450.1
branched-chain amino acid transport atp-binding protein livf (tc 3.a.1.4.1)BKIR_c33_3884Not AvailablePositive2127635 - 212829724140.8
trna uridine 5-carboxymethylaminomethyl modification enzyme gidaBKIR_c33_3885Not AvailablePositive2128297 - 213031273409.4
rrna small subunit methyltransferase, glucose inhibited division protein gidbBKIR_c33_3886Not AvailablePositive2130309 - 213097423719.1
chromosome (plasmid) partitioning protein para/ sporulation initiation inhibitor protein sojBKIR_c33_3887Not AvailablePositive2131052 - 213183128195.3
chromosome (plasmid) partitioning protein parb/ stage 0 sporulation protein jBKIR_c33_3888Not AvailablePositive2131889 - 213277931874.6

Displaying genes 1131 – 1140 of 2140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.