Vibrio tubiashii ATCC 19109

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tubiashii ATCC 19109 is characterized by its possession of six replicons, which indicates a complex genomic structure potentially contributing to its adaptability and survival in various environments. The organism is cataloged under multiple accessions, specifically NZ_CP009354.1, NZ_CP009355.1, NZ_CP009356.1, NZ_CP009357.1, NZ_CP009358.1, and NZ_CP009359.1. These accessions correspond to distinct segments of its genome, reflecting the genetic diversity and complexity within the species. As a member of the Vibrio genus, V. tubiashii is known to inhabit marine environments, where it plays a role in the ecological balance of aquatic ecosystems. Its genetic makeup, as indicated by the presence of multiple replicons, may allow for the horizontal gene transfer of traits that enhance its fitness in fluctuating marine conditions. This adaptability can include resistance to environmental stressors, which is crucial for survival in the diverse habitats it occupies. Understanding the genomic structure of V. tubiashii can provide insights into its ecological roles, particularly its interactions within marine food webs and its potential impacts on aquaculture. The complexity of its genome positions it as a subject of interest for further research in microbial ecology and evolutionary biology, particularly regarding how such traits influence the organism's behavior and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tubiashii
StrainATCC 19109

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tubiashii ATCC 19109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tubiashii ATCC 19109 chromosome 2, complete sequence.

Gene Summary

Adenine Count

490567 bp

Thymine Count

489572 bp

Guanine Count

393676 bp

Cytosine Count

392767 bp

Genome Length

1766582 bp

Protein-coding Genes

1613 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
para family proteinIX91_RS15105Not AvailableNegative3283469 - 328424228084.0
16s rrna (guanine(527)-n(7))-methyltransferase rsmgIX91_RS15110Not AvailableNegative3284257 - 328488923967.0
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgIX91_RS15115Not AvailableNegative3284889 - 328678470117.7
fmn-binding protein miocIX91_RS15120Not AvailableNegative3287250 - 328768415623.2
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeIX91_RS15125Not AvailableNegative3287737 - 328909849128.4
membrane protein insertase yidcIX91_RS15130Not AvailableNegative3289218 - 329083760412.2
membrane protein insertion efficiency factor yiddIX91_RS25885Not AvailableNegative3290840 - 32910979449.59
ribonuclease p protein componentIX91_RS15135Not AvailableNegative3291064 - 329138712433.0
50s ribosomal protein l34IX91_RS15140Not AvailableNegative3291434 - 32915685168.51
amino acid abc transporter atp-binding proteinIX91_RS15145Not AvailableNegative3291798 - 329253527093.7

Displaying genes 4711 – 4720 of 5142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.