Vibrio tubiashii ATCC 19109

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tubiashii ATCC 19109 is characterized by its possession of six replicons, which indicates a complex genomic structure potentially contributing to its adaptability and survival in various environments. The organism is cataloged under multiple accessions, specifically NZ_CP009354.1, NZ_CP009355.1, NZ_CP009356.1, NZ_CP009357.1, NZ_CP009358.1, and NZ_CP009359.1. These accessions correspond to distinct segments of its genome, reflecting the genetic diversity and complexity within the species. As a member of the Vibrio genus, V. tubiashii is known to inhabit marine environments, where it plays a role in the ecological balance of aquatic ecosystems. Its genetic makeup, as indicated by the presence of multiple replicons, may allow for the horizontal gene transfer of traits that enhance its fitness in fluctuating marine conditions. This adaptability can include resistance to environmental stressors, which is crucial for survival in the diverse habitats it occupies. Understanding the genomic structure of V. tubiashii can provide insights into its ecological roles, particularly its interactions within marine food webs and its potential impacts on aquaculture. The complexity of its genome positions it as a subject of interest for further research in microbial ecology and evolutionary biology, particularly regarding how such traits influence the organism's behavior and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tubiashii
StrainATCC 19109

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tubiashii ATCC 19109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tubiashii ATCC 19109 chromosome 2, complete sequence.

Gene Summary

Adenine Count

490567 bp

Thymine Count

489572 bp

Guanine Count

393676 bp

Cytosine Count

392767 bp

Genome Length

1766582 bp

Protein-coding Genes

1613 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metalloprotease pmbaIX91_RS13245Not AvailableNegative2911565 - 291290848430.0
ribosome biogenesis factor yjgaIX91_RS13250Not AvailablePositive2913018 - 291354520425.4
thiamine abc transporter atp-binding proteinIX91_RS13255Not AvailableNegative2913789 - 291449325780.8
thiamine/thiamine pyrophosphate abc transporter permease thipIX91_RS13260Not AvailableNegative2914477 - 291608159292.1
thiamine abc transporter substrate binding subunitIX91_RS13265Not AvailableNegative2916091 - 291707736259.5
flavin prenyltransferase ubixIX91_RS13270Not AvailableNegative2917315 - 291794122555.4
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseIX91_RS13275Not AvailableNegative2917956 - 291930849495.8
class 1 fructose-bisphosphataseIX91_RS13280Not AvailablePositive2919604 - 292062037216.1
duf2799 domain-containing proteinIX91_RS13285Not AvailableNegative2920670 - 292102913264.8
gamma-glutamylcyclotransferaseIX91_RS13290Not AvailableNegative2921073 - 292142013418.9

Displaying genes 4341 – 4350 of 5142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.