Vibrio tubiashii ATCC 19109

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tubiashii ATCC 19109 is characterized by its possession of six replicons, which indicates a complex genomic structure potentially contributing to its adaptability and survival in various environments. The organism is cataloged under multiple accessions, specifically NZ_CP009354.1, NZ_CP009355.1, NZ_CP009356.1, NZ_CP009357.1, NZ_CP009358.1, and NZ_CP009359.1. These accessions correspond to distinct segments of its genome, reflecting the genetic diversity and complexity within the species. As a member of the Vibrio genus, V. tubiashii is known to inhabit marine environments, where it plays a role in the ecological balance of aquatic ecosystems. Its genetic makeup, as indicated by the presence of multiple replicons, may allow for the horizontal gene transfer of traits that enhance its fitness in fluctuating marine conditions. This adaptability can include resistance to environmental stressors, which is crucial for survival in the diverse habitats it occupies. Understanding the genomic structure of V. tubiashii can provide insights into its ecological roles, particularly its interactions within marine food webs and its potential impacts on aquaculture. The complexity of its genome positions it as a subject of interest for further research in microbial ecology and evolutionary biology, particularly regarding how such traits influence the organism's behavior and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tubiashii
StrainATCC 19109

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tubiashii ATCC 19109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tubiashii ATCC 19109 chromosome 2, complete sequence.

Gene Summary

Adenine Count

490567 bp

Thymine Count

489572 bp

Guanine Count

393676 bp

Cytosine Count

392767 bp

Genome Length

1766582 bp

Protein-coding Genes

1613 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3360 family proteinIX91_RS09355Not AvailablePositive2065047 - 206659455179.7
formate c-acetyltransferaseIX91_RS09360Not AvailablePositive2066919 - 206919584264.9
lipid a deacylase lpxr family proteinIX91_RS09365Not AvailablePositive2069378 - 207038536899.9
methyl-accepting chemotaxis proteinIX91_RS09370Not AvailableNegative2070390 - 207227067661.9
pyruvate formate lyase 1-activating proteinIX91_RS09375Not AvailablePositive2072499 - 207323928042.4
energy-coupling factor abc transporter permeaseIX91_RS09380Not AvailablePositive2073305 - 207396725199.1
yfbu family proteinIX91_RS09385Not AvailablePositive2074096 - 207459619853.8
methyl-accepting chemotaxis proteinIX91_RS09390Not AvailableNegative2074657 - 207654367417.5
mipa/ompv family proteinIX91_RS09395Not AvailableNegative2076726 - 207741825226.7
prka family serine protein kinaseIX91_RS09400Not AvailablePositive2077854 - 207978874088.6

Displaying genes 3561 – 3570 of 5142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.