Vibrio tubiashii ATCC 19109

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tubiashii ATCC 19109 is characterized by its possession of six replicons, which indicates a complex genomic structure potentially contributing to its adaptability and survival in various environments. The organism is cataloged under multiple accessions, specifically NZ_CP009354.1, NZ_CP009355.1, NZ_CP009356.1, NZ_CP009357.1, NZ_CP009358.1, and NZ_CP009359.1. These accessions correspond to distinct segments of its genome, reflecting the genetic diversity and complexity within the species. As a member of the Vibrio genus, V. tubiashii is known to inhabit marine environments, where it plays a role in the ecological balance of aquatic ecosystems. Its genetic makeup, as indicated by the presence of multiple replicons, may allow for the horizontal gene transfer of traits that enhance its fitness in fluctuating marine conditions. This adaptability can include resistance to environmental stressors, which is crucial for survival in the diverse habitats it occupies. Understanding the genomic structure of V. tubiashii can provide insights into its ecological roles, particularly its interactions within marine food webs and its potential impacts on aquaculture. The complexity of its genome positions it as a subject of interest for further research in microbial ecology and evolutionary biology, particularly regarding how such traits influence the organism's behavior and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tubiashii
StrainATCC 19109

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tubiashii ATCC 19109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tubiashii ATCC 19109 chromosome 2, complete sequence.

Gene Summary

Adenine Count

490567 bp

Thymine Count

489572 bp

Guanine Count

393676 bp

Cytosine Count

392767 bp

Genome Length

1766582 bp

Protein-coding Genes

1613 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidaseIX91_RS21575Not AvailableNegative1421430 - 142206524242.0
hlyd family type i secretion periplasmic adaptor subunitIX91_RS21580Not AvailablePositive1422277 - 142366852152.5
transglutaminase-like cysteine peptidaseIX91_RS21585Not AvailablePositive1423730 - 142438325217.4
eal domain-containing proteinIX91_RS21590Not AvailablePositive1424389 - 142629971677.4
type i secretion system permease/atpaseIX91_RS21595Not AvailablePositive1426317 - 142843178017.6
glycosyl hydrolase family 18 proteinIX91_RS21600Not AvailableNegative1428515 - 143105289286.4
tryptophanaseIX91_RS21605Not AvailableNegative1431408 - 143280552127.3
duf2057 family proteinIX91_RS21610Not AvailablePositive1433234 - 143387223358.8
hd-gyp domain-containing proteinIX91_RS21615Not AvailableNegative1433949 - 143522048020.2
gnat family n-acetyltransferaseIX91_RS21620Not AvailablePositive1435446 - 143597920209.1

Displaying genes 1301 – 1310 of 5142 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.