Paenibacillus sp. Aloe-11

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. Aloe-11 is characterized by having a single replicon, which indicates a streamlined genetic structure typically associated with certain bacterial species. The genomic data for this strain is cataloged under the accession number AGFI00000000.1. This single replicon may reflect an adaptation to specific ecological niches or environmental conditions. The genus Paenibacillus is known for its diverse metabolic capabilities and roles in various ecological processes, including nutrient cycling and soil health. The presence of Paenibacillus sp. Aloe-11 in a particular habitat suggests its potential involvement in these ecological functions. Its single replicon could allow for efficient replication and gene expression, facilitating rapid adaptation to environmental changes. In summary, Paenibacillus sp. Aloe-11's genomic structure, characterized by a single replicon, highlights its potential ecological roles and adaptability, which may be significant in understanding its contributions to microbial communities and environmental sustainability.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. Aloe-11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatplant rhizospheres
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. Aloe-11 GW8_contig_602, whole genome shotgun

Gene Summary

Adenine Count

1547683 bp

Thymine Count

1543877 bp

Guanine Count

1350086 bp

Cytosine Count

1350394 bp

Genome Length

5792040 bp

Protein-coding Genes

5089 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator ytcd [paenibacillus senegalensis]-O34533Negative2888481 - 288882213464.8
nad(p)h oxidoreductase [bacillus caseinilyticus]-P43340Positive2889057 - 288962921936.1
rok family protein [paenibacillus montanisoli]-Not AvailablePositive2889747 - 289087741953.4
glucosamine-6-phosphate deaminase [paenibacillus montanisoli]-Q5XBG4Positive2890890 - 289160626661.0
rok family protein [paenibacillus aceti]-Q9KCZ4Positive2891626 - 289253733082.4
alpha-galactosidase [paenibacillus montanisoli]-Q9AI65Positive2892543 - 289392852444.0
glycoside hydrolase family 3 c-terminal domain-containing protein [cohnella thermotolerans]-P33363Positive2893939 - 289606279340.4
sugar abc transporter permease [cohnella thermotolerans]-Not AvailablePositive2896390 - 289730133683.7
carbohydrate abc transporter permease [cohnella thermotolerans]-P39129Positive2897317 - 289818932527.7
abc transporter substrate-binding protein [paenibacillus kribbensis]-Not AvailablePositive2898189 - 289983561562.7

Displaying genes 2571 – 2580 of 5199 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

250 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 250 metabolites

Health Effects

No health effects information available for this bacterium.