Leptospira interrogans str. UI 12621

Gram-negativeSpirillaNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Leptospiria

Order

Leptospirales

Family

Leptospiraceae

Genus

Leptospira

Description

Leptospira interrogans str. UI 12621 is a Gram-negative bacterium classified within the genus Leptospira. This organism exhibits a spirilla shape and is characterized as an aerobic microbe, requiring oxygen for growth. L. interrogans str. UI 12621 is host-associated, indicating its lifecycle involves a specific host environment. This strain has a mesophilic temperature range, with an optimal growth temperature of 28°C. It possesses a unique cellular structure with two membranes, consistent with its Gram-negative classification. Additionally, the bacterium contains one replicon, which is indicative of its genetic organization. Notably, L. interrogans str. UI 12621 has flagella, which are typically associated with motility. However, this strain is described as non-motile, suggesting that while it may have the structural components for mobility, it does not exhibit movement. The ecological insights into L. interrogans str. UI 12621 highlight its association with hosts, which can play a significant role in the epidemiology of leptospirosis, a disease caused by this pathogen. Understanding the specific habitat and physiological traits of this strain can inform public health strategies and facilitate targeted research on its biology and pathogenic mechanisms. The reference accession number for this strain is AHNQ00000000.2, which provides a pathway for further genomic and functional studies.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassLeptospiria
OrderLeptospirales
FamilyLeptospiraceae
GenusLeptospira
SpeciesLeptospira interrogans
StrainUI 12621

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Leptospira interrogans str. UI 12621
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leptospira interrogans str. UI 12621


Gene Summary

Adenine Count

1613232 bp

Thymine Count

1619816 bp

Guanine Count

885207 bp

Cytosine Count

863362 bp

Genome Length

4981617 bp

Protein-coding Genes

4699 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhs repeat proteinLEP1GSC104_3894Not AvailablePositive6887 - 852060556.5
integrase core domain proteinLEP1GSC104_3818Not AvailablePositive8640 - 87805630.47
putative membrane proteinLEP1GSC104_3819Not AvailablePositive9423 - 1056843471.1
Ncrna_class:autocatalytically_spliced_intronNot AvailableNot AvailablePositive10412 - 10484Not Available
hypothetical proteinLEP1GSC104_3820Not AvailableNegative10558 - 106985705.98
hypothetical proteinLEP1GSC104_3821Not AvailablePositive12050 - 121694751.92
pf07598 family proteinLEP1GSC104_3822Not AvailablePositive12615 - 1452272650.5
hypothetical proteinLEP1GSC104_3823Not AvailablePositive14957 - 150854959.25
ribosomal protein l17LEP1GSC104_3824Not AvailableNegative15816 - 1633120116.6
dna-directed rna polymerase, alpha subunitLEP1GSC104_3825Not AvailableNegative16333 - 1731036688.7

Displaying genes 11 – 20 of 4746 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

12 records
Metabolite IDMetabolite nameStructureCAS number
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0003208L-2-acetamido-6-oxoheptanedioateC9H11NO6Chemical structure of L-2-acetamido-6-oxoheptanedioateNot available
Average229.189Da
Monoisotopic229.059734238Da
BASm00032855-methyltetrahydropteroyltri-L-glutamateC30H35N9O12Chemical structure of 5-methyltetrahydropteroyltri-L-glutamateNot available
Average713.663Da
Monoisotopic713.2427119Da
BASm0003335L-glutamyl 5-phosphateC5H8NO7PChemical structure of L-glutamyl 5-phosphateNot available
Average225.094Da
Monoisotopic225.0049358Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003696N-acetyl-(2S,6S)-2,6-diaminoheptanedioateC9H15N2O5Chemical structure of N-acetyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average231.229Da
Monoisotopic231.098645171Da
BASm00038422-hydroxy-5-methylsulfanyl-3-oxopent-1-enyl phosphateC6H9O6PSChemical structure of 2-hydroxy-5-methylsulfanyl-3-oxopent-1-enyl phosphateNot available
Average240.17Da
Monoisotopic239.986843342Da
BASm0004097L-alanyl-D-glutamateC8H13N2O5Chemical structure of L-alanyl-D-glutamateNot available
Average217.1992Da
Monoisotopic217.082446536Da

Displaying 1–10 of 12 metabolites

Health Effects

No health effects information available for this bacterium.