Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_at00080 | Not Available | Positive | 1039027 - 1039230 | 8046.39 |
| hydroxyacylglutathione hydrolase | Rifp1Sym_at00090 | Not Available | Negative | 1039251 - 1040030 | 28382.6 |
| hypothetical protein | Rifp1Sym_at00100 | Not Available | Negative | 1040051 - 1040209 | 5662.83 |
| 1-deoxy-d-xylulose 5-phosphate synthase | Rifp1Sym_at00110 | Not Available | Negative | 1040211 - 1041962 | 63068.8 |
| rubisco operon transcriptional regulator | Rifp1Sym_at00120 | Not Available | Negative | 1042077 - 1043033 | 35717.5 |
| ribulose-1.5-bisphosphate carboxylase/oxygenase | Rifp1Sym_at00130 | Not Available | Positive | 1043238 - 1044623 | 50577.1 |
| hypothetical protein | Rifp1Sym_at00140 | Not Available | Positive | 1044762 - 1045235 | 16788.3 |
| hypothetical protein | Rifp1Sym_at00150 | Not Available | Positive | 1045395 - 1045661 | 9408.98 |
| alkylphosphonate utilization operon protein phna | Rifp1Sym_at00160 | Not Available | Negative | 1045803 - 1046384 | 21059.9 |
| glycolate oxidase iron-sulfur subunit | Rifp1Sym_at00170 | Not Available | Negative | 1046479 - 1047702 | 44407.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
