Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative copper-binding protein | Rifp1Sym_as00260 | Not Available | Negative | 1012608 - 1013126 | 18742.4 |
| cytochrome c, class i | Rifp1Sym_as00270 | Not Available | Negative | 1013396 - 1013815 | 14869.5 |
| protein of unknown function duf1334 | Rifp1Sym_as00280 | Not Available | Negative | 1013883 - 1014425 | 19653.4 |
| rna polymerase-associated protein rapa | Rifp1Sym_as00290 | Not Available | Positive | 1014552 - 1017461 | 109791.0 |
| ribosomal small subunit pseudouridine synthase a | Rifp1Sym_as00300 | Not Available | Negative | 1017560 - 1018261 | 25733.0 |
| hypothetical protein | Rifp1Sym_as00310 | Not Available | Negative | 1018721 - 1021477 | 101662.0 |
| hypothetical protein | Rifp1Sym_as00320 | Not Available | Negative | 1021584 - 1023683 | 76935.3 |
| hypothetical protein | Rifp1Sym_as00330 | Not Available | Negative | 1023822 - 1024760 | 35678.3 |
| udp-glucose 6-dehydrogenase | Rifp1Sym_as00340 | Not Available | Negative | 1025045 - 1025344 | 11016.9 |
| udp-glucose 6-dehydrogenase | Rifp1Sym_as00350 | Not Available | Negative | 1025320 - 1026339 | 36934.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
