Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase/phosphodiesterase with pas/pac and gaf sensor(s) | Rifp1Sym_as00160 | Not Available | Negative | 1001289 - 1003400 | 78677.6 |
| putative phosphohistidine phosphatase | Rifp1Sym_as00170 | Not Available | Negative | 1003423 - 1004250 | 30849.3 |
| putative lyase | Rifp1Sym_as00180 | Not Available | Positive | 1004265 - 1004753 | 18029.3 |
| hypothetical protein | Rifp1Sym_as00190 | Not Available | Negative | 1005795 - 1006661 | 32252.8 |
| protein crea | Rifp1Sym_as00200 | Not Available | Positive | 1006738 - 1007223 | 17482.2 |
| hypothetical protein | Rifp1Sym_as00210 | Not Available | Positive | 1007229 - 1007789 | 21485.6 |
| diguanylate cyclase | Rifp1Sym_as00220 | Not Available | Negative | 1007786 - 1009342 | 58328.5 |
| endonuclease/exonuclease/phosphatase | Rifp1Sym_as00230 | Not Available | Negative | 1009432 - 1010271 | 31597.0 |
| cytochrome c4 | Rifp1Sym_as00240 | Not Available | Negative | 1010393 - 1011037 | 22018.9 |
| hypothetical protein | Rifp1Sym_as00250 | Not Available | Negative | 1011482 - 1012570 | 41011.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
