Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside 5-triphosphatase | Rifp1Sym_as00070 | Not Available | Positive | 993299 - 993907 | 21961.9 |
| hypothetical protein | Rifp1Sym_as00080 | Not Available | Positive | 994049 - 994387 | 12206.5 |
| trap dicarboxylate transporter, dctm subunit | Rifp1Sym_as00090 | Not Available | Negative | 994408 - 995793 | 48763.8 |
| tripartite atp-independent periplasmic transporter, dctq component | Rifp1Sym_as00100 | Not Available | Negative | 995790 - 996320 | 19793.8 |
| hypothetical protein | Rifp1Sym_as00110 | Not Available | Negative | 996341 - 996673 | 12426.9 |
| hypothetical protein | Rifp1Sym_as00120 | Not Available | Negative | 996697 - 997422 | 27052.1 |
| 2-hydroxy-3-oxopropionate reductase | Rifp1Sym_as00130 | Not Available | Positive | 997574 - 998461 | 31057.1 |
| atp-dependent dna helicase rep | Rifp1Sym_as00140 | Not Available | Positive | 998454 - 1000460 | 76216.6 |
| cytochrome c, class i | Rifp1Sym_as00150 | Not Available | Negative | 1000525 - 1001058 | 17440.3 |
| Trna-arg | Not Available | Not Available | Positive | 1001172 - 1001248 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
