Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease yjgp/yjgq family protein | Rifp1Sym_ar00250 | Not Available | Negative | 973055 - 974164 | 41661.6 |
| cytosol aminopeptidase | Rifp1Sym_ar00260 | Not Available | Positive | 974305 - 975840 | 54913.9 |
| dna polymerase iii subunit chi | Rifp1Sym_ar00270 | Not Available | Positive | 975852 - 976304 | 17299.6 |
| hypothetical protein | Rifp1Sym_ar00280 | Not Available | Positive | 976301 - 976663 | 13648.1 |
| cupin family protein | Rifp1Sym_ar00290 | Not Available | Positive | 976693 - 977175 | 18112.6 |
| polymyxin resistance protein pmrj | Rifp1Sym_ar00300 | Not Available | Negative | 977262 - 978161 | 32761.2 |
| peptidase u32 | Rifp1Sym_ar00310 | Not Available | Negative | 978158 - 979507 | 50347.1 |
| hypothetical protein | Rifp1Sym_ar00320 | Not Available | Negative | 979539 - 979712 | 6531.7 |
| hypothetical protein | Rifp1Sym_ar00330 | Not Available | Negative | 979777 - 980679 | 34003.9 |
| hypothetical protein | Rifp1Sym_ar00340 | Not Available | Positive | 980741 - 980950 | 7593.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
