Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | Rifp1Sym_ar00050 | Not Available | Positive | 951010 - 951291 | 10796.1 |
| hypothetical protein | Rifp1Sym_ar00060 | Not Available | Positive | 951288 - 951908 | 22702.4 |
| short chain dehydrogenase | Rifp1Sym_ar00070 | Not Available | Positive | 951898 - 952614 | 26103.6 |
| putative methyltransferase | Rifp1Sym_ar00080 | Not Available | Positive | 952611 - 953333 | 27182.7 |
| invasion gene expression up-regulator, sirb | Rifp1Sym_ar00090 | Not Available | Positive | 953410 - 953823 | 15329.5 |
| h+-atpase, subunit h | Rifp1Sym_ar00100 | Not Available | Positive | 954139 - 954363 | 8527.94 |
| v-type atp synthase subunit c | Rifp1Sym_ar00110 | Not Available | Positive | 954473 - 955525 | 40062.9 |
| v-type atp synthase subunit i | Rifp1Sym_ar00120 | Not Available | Positive | 955553 - 957430 | 69800.3 |
| h+-transporting two-sector atpase, c subunit | Rifp1Sym_ar00130 | Not Available | Positive | 957524 - 957961 | 14816.1 |
| v-type atp synthase subunit e | Rifp1Sym_ar00140 | Not Available | Positive | 958275 - 958934 | 25619.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
