Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex protein rnfa1 | Rifp1Sym_aa00780 | Not Available | Positive | 87388 - 87966 | 20733.3 |
| putative nuclease | Rifp1Sym_aa00790 | Not Available | Negative | 88196 - 88882 | 25926.2 |
| 50s ribosomal protein l31 | Rifp1Sym_aa00800 | Not Available | Negative | 89037 - 89297 | 9734.64 |
| hypothetical protein | Rifp1Sym_aa00810 | Not Available | Negative | 89333 - 89773 | 16617.1 |
| hypothetical protein | Rifp1Sym_aa00820 | Not Available | Positive | 90216 - 90680 | 17500.4 |
| transcriptional activator protein fnra | Rifp1Sym_aa00830 | Not Available | Negative | 90786 - 91547 | 27493.3 |
| oxygen-independent coproporphyrinogen-iii oxidase-like protein | Rifp1Sym_aa00840 | Not Available | Negative | 91728 - 92879 | 42489.4 |
| trap transporter solute receptor | Rifp1Sym_aa00850 | Not Available | Negative | 92941 - 94026 | 39477.6 |
| putative signal transduction protein | Rifp1Sym_aa00860 | Not Available | Negative | 94165 - 95103 | 34146.0 |
| atp-dependent dna helicase uvrd/pcra | Rifp1Sym_aa00870 | Not Available | Negative | 95133 - 95363 | 8161.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
