Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v beta chain | Rifp1Sym_aq00340 | Not Available | Positive | 938070 - 941828 | 139919.0 |
| exodeoxyribonuclease v alpha chain | Rifp1Sym_aq00350 | Not Available | Positive | 941825 - 942550 | 25870.9 |
| exodeoxyribonuclease v alpha chain | Rifp1Sym_aq00360 | Not Available | Positive | 942528 - 943658 | 40577.1 |
| Trna-thr | Not Available | Not Available | Positive | 943699 - 943774 | Not Available |
| glycine oxidase thio | Rifp1Sym_aq00370 | Not Available | Negative | 943828 - 944931 | 40060.4 |
| type iv fimbrial biogenesis protein fimt | Rifp1Sym_aq00380 | Not Available | Positive | 945000 - 945695 | 24559.7 |
| type iv pilus modification protein pilv | Rifp1Sym_aq00390 | Not Available | Positive | 945699 - 946235 | 19115.8 |
| peptide chain release factor 2, programmed frameshift | Rifp1Sym_ar00020 | Not Available | Negative | 948165 - 949211 | 38637.2 |
| hypothetical protein | Rifp1Sym_ar00030 | Not Available | Negative | 949434 - 950213 | 29822.9 |
| glycosyl transferase | Rifp1Sym_ar00040 | Not Available | Positive | 950453 - 950989 | 19818.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
