Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_aq00240 | Not Available | Negative | 928479 - 928769 | 10858.4 |
| yggt family protein | Rifp1Sym_aq00250 | Not Available | Negative | 928769 - 929347 | 21379.5 |
| delta 1-pyrroline-5-carboxylate reductase | Rifp1Sym_aq00260 | Not Available | Negative | 929344 - 930273 | 32352.7 |
| pyridoxal phosphate enzyme yggs | Rifp1Sym_aq00270 | Not Available | Negative | 930286 - 930975 | 25624.9 |
| twitching mobility protein | Rifp1Sym_aq00280 | Not Available | Positive | 931139 - 932173 | 37783.8 |
| twitching mobility protein | Rifp1Sym_aq00290 | Not Available | Positive | 932136 - 933401 | 47404.2 |
| hypothetical protein | Rifp1Sym_aq00300 | Not Available | Negative | 933418 - 933924 | 18443.1 |
| ankyrin | Rifp1Sym_aq00310 | Not Available | Negative | 933982 - 934569 | 20882.8 |
| hypothetical protein | Rifp1Sym_aq00320 | Not Available | Negative | 934631 - 935020 | 14736.6 |
| exodeoxyribonuclease v gamma chain | Rifp1Sym_aq00330 | Not Available | Positive | 935057 - 938290 | 119992.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
