Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_aq00040 | Not Available | Negative | 907261 - 907767 | 18486.4 |
| putative abc-type transport system | Rifp1Sym_aq00050 | Not Available | Negative | 907733 - 909055 | 48794.8 |
| putative abc transporter, permease protein | Rifp1Sym_aq00060 | Not Available | Negative | 909058 - 909774 | 25916.3 |
| atp-binding transport protein nata | Rifp1Sym_aq00070 | Not Available | Negative | 909771 - 910733 | 35597.0 |
| hydantoin utilization protein a | Rifp1Sym_aq00080 | Not Available | Positive | 910742 - 912772 | 71362.5 |
| diguanylate phosphodiesterase | Rifp1Sym_aq00090 | Not Available | Negative | 912963 - 914000 | 39285.6 |
| 50s ribosomal protein l33 | Rifp1Sym_aq00100 | Not Available | Negative | 914176 - 914331 | 6038.56 |
| 50s ribosomal protein l28 | Rifp1Sym_aq00110 | Not Available | Negative | 914346 - 914582 | 9097.07 |
| dna repair protein radc | Rifp1Sym_aq00120 | Not Available | Negative | 914684 - 915358 | 25222.4 |
| coenzyme a biosynthesis bifunctional protein coabc | Rifp1Sym_aq00130 | Not Available | Positive | 915531 - 916748 | 42935.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
