Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glmz(srna)-inactivating ntpase | Rifp1Sym_ap00260 | Not Available | Negative | 889707 - 890585 | 33218.6 |
| hpr kinase/phosphorylase | Rifp1Sym_ap00270 | Not Available | Negative | 890647 - 891624 | 35464.5 |
| nitrogen regulatory protein | Rifp1Sym_ap00280 | Not Available | Negative | 891621 - 892091 | 17161.7 |
| putative sigma-54 modulation protein | Rifp1Sym_ap00290 | Not Available | Negative | 892109 - 892525 | 15884.9 |
| rna polymerase sigma-54 factor | Rifp1Sym_ap00300 | Not Available | Negative | 892503 - 893978 | 55424.5 |
| lipopolysaccharide export system atp-binding protein lptb | Rifp1Sym_ap00310 | Not Available | Negative | 894143 - 894868 | 26832.5 |
| lpta, protein essential for lps transport across the periplasm | Rifp1Sym_ap00320 | Not Available | Negative | 894865 - 895377 | 19229.2 |
| rna polymerase sigma-54 factor | Rifp1Sym_ap00330 | Not Available | Negative | 895355 - 895918 | 21106.8 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | Rifp1Sym_ap00340 | Not Available | Negative | 895925 - 896446 | 19217.2 |
| arabinose 5-phosphate isomerase | Rifp1Sym_ap00350 | Not Available | Negative | 896648 - 897646 | 34988.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
