Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_ao00100 | Not Available | Positive | 826398 - 826922 | 19763.7 |
| lipoprotein-releasing system atp-binding protein lold | Rifp1Sym_ao00110 | Not Available | Negative | 826976 - 827662 | 24631.7 |
| lipoprotein-releasing system transmembrane protein lolc | Rifp1Sym_ao00120 | Not Available | Negative | 827655 - 829040 | 50347.4 |
| hypothetical protein | Rifp1Sym_ao00130 | Not Available | Positive | 829150 - 829299 | 5966.1 |
| putative agmatine deiminase | Rifp1Sym_ao00140 | Not Available | Positive | 829320 - 830366 | 38497.9 |
| n-carbamoylputrescine amidase | Rifp1Sym_ao00150 | Not Available | Positive | 830372 - 831274 | 33329.6 |
| anthranilate phosphoribosyltransferase | Rifp1Sym_ao00160 | Not Available | Positive | 831335 - 832444 | 40140.5 |
| putative dioxygenase ferredoxin subunit | Rifp1Sym_ao00170 | Not Available | Positive | 832441 - 832761 | 11699.3 |
| molybdenum cofactor biosynthesis protein a | Rifp1Sym_ao00180 | Not Available | Negative | 833120 - 834100 | 36981.8 |
| cytochrome c-type protein napc | Rifp1Sym_ao00190 | Not Available | Negative | 834433 - 834999 | 21400.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
