Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s) | Rifp1Sym_an00390 | Not Available | Positive | 803851 - 806712 | 106060.0 |
| short-chain dehydrogenase/reductase sdr | Rifp1Sym_an00400 | Not Available | Positive | 806798 - 807511 | 25591.6 |
| rhodanese domain protein | Rifp1Sym_an00410 | Not Available | Positive | 807524 - 808255 | 26764.4 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | Rifp1Sym_an00420 | Not Available | Positive | 808391 - 809185 | 28639.3 |
| hypothetical protein | Rifp1Sym_an00430 | Not Available | Positive | 809281 - 809394 | 4192.32 |
| 2-isopropylmalate synthase | Rifp1Sym_an00440 | Not Available | Positive | 809521 - 811071 | 55412.3 |
| phage type dna polymerase | Rifp1Sym_an00450 | Not Available | Positive | 811087 - 811956 | 31818.5 |
| putative acetyltransferase | Rifp1Sym_an00460 | Not Available | Positive | 811953 - 812417 | 17755.7 |
| peptide chain release factor 3 | Rifp1Sym_an00470 | Not Available | Positive | 812491 - 814074 | 59510.5 |
| hypothetical protein | Rifp1Sym_an00480 | Not Available | Positive | 814178 - 814408 | 8348.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
