Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_an00290 | Not Available | Positive | 796104 - 796337 | 9081.33 |
| hypothetical protein | Rifp1Sym_an00300 | Not Available | Positive | 796393 - 796500 | 3595.51 |
| hypothetical protein | Rifp1Sym_an00310 | Not Available | Positive | 796488 - 796592 | 3512.26 |
| diguanylate cyclase/phosphodiesterase (ggdef & eal domains) with pas/pac sensor(s) | Rifp1Sym_an00320 | Not Available | Positive | 796686 - 799139 | 91581.9 |
| protein of unknown function duf971 | Rifp1Sym_an00330 | Not Available | Negative | 799136 - 799525 | 15040.8 |
| ferrochelatase, protoheme ferro-lyase | Rifp1Sym_an00340 | Not Available | Negative | 799525 - 800577 | 40150.7 |
| hypothetical protein | Rifp1Sym_an00350 | Not Available | Negative | 800584 - 801528 | 35232.8 |
| putative conserved protein ybga | Rifp1Sym_an00360 | Not Available | Positive | 801622 - 802137 | 18875.0 |
| hypothetical protein | Rifp1Sym_an00370 | Not Available | Positive | 802153 - 802644 | 18200.3 |
| hypothetical protein | Rifp1Sym_an00380 | Not Available | Positive | 802610 - 803845 | 45743.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
