Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_an00190 | Not Available | Negative | 785253 - 785669 | 15663.1 |
| putative rna polymerase sigma-e factor | Rifp1Sym_an00200 | Not Available | Positive | 785827 - 786360 | 20367.4 |
| hypothetical protein | Rifp1Sym_an00210 | Not Available | Positive | 786357 - 786707 | 13253.8 |
| hypothetical protein | Rifp1Sym_an00220 | Not Available | Positive | 786884 - 787387 | 20072.9 |
| circadian clock protein kaib | Rifp1Sym_an00230 | Not Available | Negative | 787384 - 787683 | 10888.2 |
| response regulator receiver domain protein | Rifp1Sym_an00240 | Not Available | Negative | 787696 - 788082 | 13956.9 |
| sensor protein fixl | Rifp1Sym_an00250 | Not Available | Negative | 788134 - 790539 | 87546.5 |
| urea abc transporter, urea binding protein | Rifp1Sym_an00260 | Not Available | Negative | 790464 - 791732 | 47363.5 |
| putative diguanylate cyclase/phosphodiesterase | Rifp1Sym_an00270 | Not Available | Negative | 791729 - 794518 | 104816.0 |
| argininosuccinate synthase | Rifp1Sym_an00280 | Not Available | Positive | 794745 - 795965 | 45409.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
