Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate synthase, alpha subunit | Rifp1Sym_aa00580 | Not Available | Positive | 62934 - 64910 | 72063.3 |
| 2-oxoglutarate oxidoreductase, beta subunit | Rifp1Sym_aa00590 | Not Available | Positive | 64923 - 65876 | 35076.0 |
| putative pyruvate flavodoxin/ferredoxin oxidoreductase | Rifp1Sym_aa00600 | Not Available | Positive | 65910 - 68405 | 91133.2 |
| s23 ribosomal protein | Rifp1Sym_aa00610 | Not Available | Positive | 68459 - 68881 | 15811.8 |
| electron transport complex protein rnfb | Rifp1Sym_aa00620 | Not Available | Positive | 68957 - 69790 | 28913.5 |
| pyruvate flavodoxin/ferredoxin oxidoreductase domain protein | Rifp1Sym_aa00630 | Not Available | Positive | 69723 - 74285 | 164474.0 |
| succinyl-coa synthetase, beta subunit | Rifp1Sym_aa00640 | Not Available | Positive | 74343 - 75503 | 40542.0 |
| succinyl-coa synthtase, alpha subunit | Rifp1Sym_aa00650 | Not Available | Positive | 75594 - 76463 | 29580.9 |
| trna (adenine-n(6)-)-methyltransferase | Rifp1Sym_aa00660 | Not Available | Positive | 76408 - 77244 | 30729.8 |
| hypothetical protein | Rifp1Sym_aa00670 | Not Available | Positive | 77319 - 77726 | 15309.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
