Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pyruvate-ferredoxin oxidoreductase, alpha subunit | Rifp1Sym_al00270 | Not Available | Negative | 705023 - 710008 | 184055.0 |
| fe-s cluster domain protein | Rifp1Sym_al00280 | Not Available | Negative | 710036 - 710932 | 31249.5 |
| cys-loop ligand-gated ion channel | Rifp1Sym_al00290 | Not Available | Negative | 711186 - 712223 | 40011.6 |
| transposase insh for insertion sequence element is5y | Rifp1Sym_al00300 | Not Available | Positive | 713149 - 713376 | 8694.45 |
| is5 transposase | Rifp1Sym_al00310 | Not Available | Positive | 713421 - 713588 | 6175.46 |
| transposase | Rifp1Sym_al00320 | Not Available | Positive | 713651 - 714034 | 14802.9 |
| maf-like protein | Rifp1Sym_al00330 | Not Available | Negative | 714141 - 714749 | 21708.0 |
| hypothetical protein | Rifp1Sym_al00340 | Not Available | Positive | 715038 - 715304 | 9579.08 |
| oxaloacetate decarboxylase alpha chain | Rifp1Sym_al00350 | Not Available | Positive | 715365 - 717164 | 64811.0 |
| putative oxaloacetate decarboxylase beta chain | Rifp1Sym_al00360 | Not Available | Positive | 717169 - 718308 | 39363.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
