Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory transduction histidine kinase | Rifp1Sym_al00070 | Not Available | Positive | 677524 - 679644 | 81635.0 |
| transcriptional regulatory protein degu | Rifp1Sym_al00080 | Not Available | Positive | 679776 - 680363 | 21187.8 |
| hypothetical protein | Rifp1Sym_al00090 | Not Available | Positive | 680299 - 680571 | 10157.5 |
| putative signaling protein | Rifp1Sym_al00100 | Not Available | Positive | 680883 - 684590 | 138375.0 |
| hypothetical protein | Rifp1Sym_al00110 | Not Available | Positive | 684666 - 685283 | 22144.9 |
| hypothetical protein | Rifp1Sym_al00120 | Not Available | Positive | 685386 - 685580 | 7323.7 |
| rubredoxin | Rifp1Sym_al00130 | Not Available | Positive | 685607 - 685765 | 5945.98 |
| metal dependent phosphohydrolase | Rifp1Sym_al00140 | Not Available | Positive | 685795 - 686856 | 39763.7 |
| dna-binding response regulator, excisionase family | Rifp1Sym_al00150 | Not Available | Positive | 686987 - 687700 | 26411.4 |
| putative signaling protein | Rifp1Sym_al00160 | Not Available | Positive | 687697 - 690945 | 120833.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
