Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob--com heterodisulfide reductase subunit b 1 | Rifp1Sym_ak00380 | Not Available | Positive | 650508 - 651407 | 32369.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | Rifp1Sym_ak00390 | Not Available | Negative | 651742 - 652263 | 18938.4 |
| hypothetical protein | Rifp1Sym_ak00400 | Not Available | Negative | 652588 - 652893 | 11506.3 |
| hpp family protein | Rifp1Sym_ak00410 | Not Available | Negative | 652970 - 653524 | 19509.4 |
| dsrc family protein | Rifp1Sym_ak00420 | Not Available | Negative | 653729 - 654094 | 14228.6 |
| respiratory nitrate reductase gamma chain | Rifp1Sym_ak00430 | Not Available | Negative | 654157 - 654852 | 25791.0 |
| respiratory nitrate reductase delta chain | Rifp1Sym_ak00440 | Not Available | Negative | 654865 - 655380 | 19472.4 |
| respiratory nitrate reductase beta chain | Rifp1Sym_ak00450 | Not Available | Negative | 655396 - 657003 | 60462.1 |
| nitrite extrusion protein 1 | Rifp1Sym_ak00470 | Not Available | Negative | 660929 - 662533 | 57866.9 |
| putative nitrate transporter nart | Rifp1Sym_ak00480 | Not Available | Negative | 662564 - 664108 | 57155.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
