Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis protein piln | Rifp1Sym_aa00480 | Not Available | Negative | 50538 - 51128 | 22206.1 |
| type iv pilus biogenesis protein pilm | Rifp1Sym_aa00490 | Not Available | Negative | 51098 - 52195 | 39081.6 |
| penicillin-binding protein 1a | Rifp1Sym_aa00500 | Not Available | Positive | 52541 - 54988 | 90236.7 |
| hypothetical protein | Rifp1Sym_aa00510 | Not Available | Positive | 54997 - 55602 | 22744.2 |
| citrate synthase | Rifp1Sym_aa00520 | Not Available | Negative | 55612 - 56910 | 48776.5 |
| malate dehydrogenase | Rifp1Sym_aa00530 | Not Available | Negative | 56945 - 57898 | 33878.1 |
| malate dehydrogenase | Rifp1Sym_aa00540 | Not Available | Positive | 57965 - 59056 | 38754.4 |
| ferredoxin | Rifp1Sym_aa00550 | Not Available | Positive | 59067 - 59693 | 23371.2 |
| l-aspartate oxidase | Rifp1Sym_aa00560 | Not Available | Positive | 59714 - 61333 | 58747.3 |
| nadh-quinone oxidoreductase subunit f 2 | Rifp1Sym_aa00570 | Not Available | Positive | 61337 - 62590 | 45194.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
