Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer | Rifp1Sym_ak00080 | Not Available | Positive | 621703 - 623193 | 55088.3 |
| hypothetical protein | Rifp1Sym_ak00090 | Not Available | Negative | 623214 - 623450 | 8793.21 |
| anthranilate synthase component ii | Rifp1Sym_ak00100 | Not Available | Negative | 623489 - 624067 | 21159.3 |
| anthranilate synthase component 1 | Rifp1Sym_ak00110 | Not Available | Negative | 624070 - 625602 | 56156.3 |
| phosphoglycolate phosphatase | Rifp1Sym_ak00120 | Not Available | Negative | 625738 - 626418 | 24919.0 |
| ribulose-phosphate 3-epimerase | Rifp1Sym_ak00130 | Not Available | Negative | 626568 - 627260 | 24819.9 |
| hypothetical protein | Rifp1Sym_ak00140 | Not Available | Positive | 627465 - 628280 | 30558.0 |
| putative soluble lytic transglycosylase fused to abc-type amino acid-binding protein | Rifp1Sym_ak00150 | Not Available | Negative | 628282 - 628854 | 22253.9 |
| hypothetical protein | Rifp1Sym_ak00160 | Not Available | Negative | 628857 - 629102 | 8671.97 |
| dnaj-like protein djla | Rifp1Sym_ak00170 | Not Available | Negative | 629220 - 630023 | 29811.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
