Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridylate kinase | Rifp1Sym_aj00210 | Not Available | Positive | 589567 - 590289 | 25120.8 |
| ribosome-recycling factor | Rifp1Sym_aj00220 | Not Available | Positive | 590273 - 590848 | 21712.1 |
| undecaprenyl pyrophosphate synthase | Rifp1Sym_aj00230 | Not Available | Positive | 590887 - 591663 | 28901.5 |
| phosphatidate cytidylyltransferase | Rifp1Sym_aj00240 | Not Available | Positive | 591668 - 592489 | 29879.9 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | Rifp1Sym_aj00250 | Not Available | Positive | 592486 - 593667 | 42570.3 |
| putative zinc metalloprotease | Rifp1Sym_aj00260 | Not Available | Positive | 593691 - 595055 | 49808.1 |
| outer membrane protein assembly factor | Rifp1Sym_aj00270 | Not Available | Positive | 595234 - 597519 | 85028.3 |
| outer membrane chaperone skp (omph) | Rifp1Sym_aj00280 | Not Available | Positive | 597537 - 598049 | 19983.3 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | Rifp1Sym_aj00290 | Not Available | Positive | 598065 - 599111 | 36451.6 |
| (3r)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase | Rifp1Sym_aj00300 | Not Available | Positive | 599108 - 599572 | 17138.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
