Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type cbb3 cytochrome oxidase biogenesis protein ccog | Rifp1Sym_aj00010 | Not Available | Positive | 564859 - 566289 | 54022.1 |
| fixh family protein | Rifp1Sym_aj00020 | Not Available | Positive | 566353 - 566874 | 19901.9 |
| type cbb3 cytochrome oxidase biogenesis protein ccoi | Rifp1Sym_aj00030 | Not Available | Positive | 566881 - 569412 | 91218.6 |
| type cbb3 cytochrome oxidase biogenesis protein ccos | Rifp1Sym_aj00040 | Not Available | Positive | 569396 - 569650 | 9651.64 |
| hypothetical protein | Rifp1Sym_aj00050 | Not Available | Negative | 569635 - 570315 | 24675.8 |
| hypothetical protein | Rifp1Sym_aj00060 | Not Available | Positive | 570508 - 571083 | 21398.7 |
| hypothetical protein | Rifp1Sym_aj00070 | Not Available | Negative | 571080 - 571505 | 15530.9 |
| diguanylate cyclase with pas/pac sensor | Rifp1Sym_aj00080 | Not Available | Negative | 571522 - 573402 | 70416.9 |
| hypothetical protein | Rifp1Sym_aj00090 | Not Available | Negative | 573390 - 574529 | 41092.7 |
| aspartate aminotransferase | Rifp1Sym_aj00100 | Not Available | Positive | 577907 - 579142 | 46266.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
