Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erfk/ybis/ycfs/ynhg family protein | Rifp1Sym_ai00480 | Not Available | Positive | 556519 - 557025 | 18521.2 |
| dipeptide transport system permease protein dppb | Rifp1Sym_ai00490 | Not Available | Positive | 557018 - 557941 | 33185.6 |
| dipeptide transport system permease protein dppc | Rifp1Sym_ai00500 | Not Available | Positive | 557938 - 558738 | 27832.0 |
| flagellar biosynthesis protein flil | Rifp1Sym_ai00510 | Not Available | Negative | 558731 - 559144 | 15316.8 |
| beta-hexosaminidase | Rifp1Sym_ai00520 | Not Available | Positive | 559252 - 560301 | 38525.0 |
| hypoxanthine-guanine phosphoribosyltransferase | Rifp1Sym_ai00530 | Not Available | Positive | 560318 - 560875 | 20368.3 |
| hypothetical protein | Rifp1Sym_ai00540 | Not Available | Positive | 561110 - 561574 | 17858.6 |
| alkyl hydroperoxide reductase | Rifp1Sym_ai00550 | Not Available | Positive | 561788 - 562393 | 22035.0 |
| s-methyl-5'-thioadenosine phosphorylase | Rifp1Sym_ai00560 | Not Available | Positive | 562528 - 563274 | 27201.8 |
| hypothetical protein | Rifp1Sym_ai00570 | Not Available | Positive | 563295 - 564002 | 26075.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
