Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| seryl-trna synthetase | Rifp1Sym_ai00190 | Not Available | Positive | 528966 - 530234 | 47300.1 |
| hypothetical protein | Rifp1Sym_ai00200 | Not Available | Negative | 530276 - 530455 | 6579.54 |
| putative hflbkc-binding inner membrane protein | Rifp1Sym_ai00210 | Not Available | Negative | 530528 - 531196 | 23537.8 |
| Trna-ser | Not Available | Not Available | Positive | 531368 - 531458 | Not Available |
| inositol monophosphatase | Rifp1Sym_ai00220 | Not Available | Negative | 531519 - 532454 | 34181.3 |
| putative choline kinase | Rifp1Sym_ai00230 | Not Available | Negative | 532421 - 533434 | 38330.9 |
| l-aspartate oxidase | Rifp1Sym_ai00240 | Not Available | Negative | 534096 - 535724 | 60916.3 |
| rna polymerase sigma-h factor | Rifp1Sym_ai00250 | Not Available | Positive | 535853 - 536488 | 24061.0 |
| sigma factor rpoe negative regulatory protein rsea | Rifp1Sym_ai00260 | Not Available | Positive | 536503 - 536883 | 13924.7 |
| hypothetical protein | Rifp1Sym_ai00270 | Not Available | Positive | 536874 - 537017 | 5338.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
